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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs58019258 chr1:201890831 A/G TM4SF5 chr17:4675179-4686508:+ 0.93 8.06 1.03E-10 Box Plot
ACC rs58241449 chr16:8040145 G/A ABR chr17:906758-1132315:- -1.08 -7.72 3.6E-10 Box Plot
ACC rs58253553 chr3:69196790 TTG/T PRHOXNB chr13:28552243-28562774:- -0.67 -8.15 7.41E-11 Box Plot
ACC rs58318860 chr8:80957997 T/C PRHOXNB chr13:28552243-28562774:- 0.77 10.35 3.17E-14 Box Plot
ACC rs5833210 chr2:107398442 GC/G PRAMEF16 chr1:13495254-13498260:+ 0.67 9.56 4.72E-13 Box Plot
ACC rs58375061 chr13:105090265 A/AT DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs584308 chr13:54734591 T/C OR5V1 chr6:29323007-29399744:- 0.57 7.55 6.51E-10 Box Plot
ACC rs58463849 chr8:74443467 G/A PRHOXNB chr13:28552243-28562774:- 0.6 8.47 2.33E-11 Box Plot
ACC rs58548445 chr10:61385227 TAA/TAAA GAGE2D chrX:49207160-49214420:+ 0.59 8.42 2.77E-11 Box Plot
ACC rs58591260 chr1:201900644 C/T TM4SF5 chr17:4675179-4686508:+ 0.93 8.08 9.37E-11 Box Plot
ACC rs58639537 chr8:74421597 T/C PRHOXNB chr13:28552243-28562774:- 0.57 8.22 5.67E-11 Box Plot
ACC rs58710556 chr13:105085499 C/G DUPD1 chr10:76797594-76818272:- 0.97 8.11 8.5E-11 Box Plot
ACC rs58737095 chr7:47178054 A/C DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs58909954 chr9:5928388 A/T DSC1 chr18:28709199-28742819:- 0.91 8.68 1.1E-11 Box Plot
ACC rs58946223 chr13:72504188 C/T PRHOXNB chr13:28552243-28562774:- 0.65 7.92 1.68E-10 Box Plot